Latest entries

Tag cloud

simulation guidelines cellml dicom modelling imaging visualization grid video conferencing analysis electrophysiology middleware audio conferencing cardiac data fusion workflow framework finite element image distributed computing visualisation segmentation markup language medical images systems biology sbml modelling language java image processing parallel repository user interface mesh generation models ontologies fluid structure interaction fluid dynamics soft tissue volume rendering linear algebra registration modeling diffusion meshes molecular simulations data nifti odes molecular dynamics software gpu computing solver molecular dynamics viewer deisa finite difference modeling algorithms atomic polarizabilities bulk density surface tension mesh simulation program diffusive behavior of ions c++ object libraries 3d modeling kernel software platform for development of cad/cam/cae applications webgl virtual patient mvp authoring workflows statistics view measurement medical image windows bioinformatics gnustep multiscale c++ framework based multiformalism high performance productivity cocoa multiresolution parameter database kidney fortran 90 simultaneous linear equations least squares solutions of linear systems of equations renal physiome singular value problems differential equations eigenvalue problems edition electromechanics boolean automata networks designing discrete dynamical pathways systems neural regulatory gene biological agile ontology test driven cancer forward engineering design implants guides templates patient specific medical images browser processing reverse engineering boinc microsecond simulations access grid lhdl data repository chat plugin fortran aneurysm nonlinear equation cardiotek converter curation linear equation fusion rheology egee collaborative meeting facility super computer modular aecg network analysis data integration visualization therapeutic schemes images genotype phenotype filtering tensor tracking research dynamical systems glue code opencv imaging informatics file management quality assurance graphing visualization data analysis network analysis link analysis computer vision multiphysics solver conservation element and solution element cese filteration cleansing jsim physiome numerical model c++ library partial differential equations pde pipelines image processing algorithms c++ library vessels centerlines bifurcations geometry morphology mesh generation regression data pre processing classification alignment solvers clustering bifurcations association rules phaseplane analysis machine learning algorithms data mining web based software project management data resources pacs connection enhanced wiki and issue tracking system software development grid system development environment hemodynamics vascular network modelling solver end user editor interface computing resources node metrics threshold nonlinear febio extract code structure data visulaisation network metrics web sites content management system cms grayscale networks collaborati inheritance diagrams brain network vessels tortuosity vasculature and unix man compressed html hyperlinked pdf postscript documentation browser off line reference manual rtf ms word dependency graphs surgical navigations java library groupware tool biomechanical simulations command line tool medical imaging software tool registering medical imaging data analyzing visualizing c or c++ applications assemble compile geometric transformations java image processing program knowledge base processing for numerical simulation document management system project development space web based collaboration platform build of java applications rstats library bioprocessing analyze biodata dynamic structure dynamics brain fmri biojava anatomist oncology perfusion mass transport meshing heat transfer electrocardiology transport in porous media manage workflow matrix type glue library algorithms numerical computations numerical solution of linear and nonlinear problems interactve constructive solid geometry csg spline curves cross compilator extensive graphics capabilities for data visualization and manipulation 3d images livewire kitware software application open source interpreted language multiplatform triangular quadrilateral meshes site maintenance and modifying content editing publishing website maintenance medical numerical experiments biochemical networks multithreading gui functionality dimensions mesh fitting compilation symbolic model authoring biotransport biomechanics physiology bioengineering medical image display application flexible display and interpretation aligned image volumes dual modality pet/ct images problem solving environment image loading paraview gui applications interfaced vector type sparse generic c++ template library automatic mesh generation tool boundary representations brep/iges/step opencascade skyline matrix/vector linear algebra library dense and skyline matrices extensible framework computational biomechanics continuous integration tool continuous build process database core widgets gui toolkits interface application programming interface library metadata enabling optimal performance annotation programming techniques optimization application development framework dynamic programming language web and desktop applications networking administration language graphical user interface toolkit parallel finite element solutions partial differential equations gsengine viewers code generators numerical methods presentation medical science apps debuggers rendering bio informatics mesh visualisation temporal data frechet differentiation of symbolic objects differentiable simulations optimization root finding simulation t random numbers gpu acceleration numerical integration application development signal processing statistics control system design & analysis maths & simulation 2 d & 3 d visualization optimization ide cross platform uncertainty quantification adaptive error contr multibody dynamics molecular visualization animating graphics scripting transillumination chaste deploying and managing software building application frameworks storage resources extensible development platform portal portlet runtimes medical optical tomography time resolved absorption spatial distribution forward model scattering media simulation of light transport grid computing source configuration management scm cellml models digital imaging and communications in medicine version control system simulations efficient code generation operator overloading mathematical notation packed and sparse matrices blas level c++ template class library portable desktop environment server applications ps3grid is a supercomputing infrastructure which delivers high performance develop applications expression templates collaborative software development tool organize and manage automatically tuned linear algebra software cache based architectures linear algebra kernels positrons photon transport application programming api graphical user interface gui fortran monte carlo code simulation of coupled electron photon transport matter control management tool materialise full atomic bio molecular simulations of protein dynamics and protein association engineering on anatomy 3d model medical image processing digital cad remesh 3d analysis iges cloud points pre processing freeform 3d gui desktop applications mimics bremsstrahlung monte carlo method full featured version control system high energy reactions computational neuroscience polynomial approximation functions algebraic equations real time partial differential equations pde cvrg cardiovascular grid tools ontologies data integration ode solver 3d visualisation neuroml integral equations dae solver pacs graphical interface or text input for model definition multi physic deformations loni tools data brain atlas imaging visualization web services neuroscience finite element and boundary element meshes mesh creation mathematical field visualisation gene products high energy nuclear and accelerator physics consistent descriptions passage of particles through matter medical simulation realistic rendering physics based animations collision response collision detection biomedical domain interoperable ontology standard governance standardizing gene and gene product attributes measure analyses 3d models provenance gene product annotation data gene product characteristics controlled vocabulary lattice boltzmann method constrained delaunay tetrahedralization tetrahedral mesh 2d and 3d cfd fluid flows mesh quality delaunay tetrahedralization store biomedical data finite element analysis results gait analysis data time varying signals fuse shared desktop import software construction tool build tool dicom format musculo skeletal advanced information system simulate histopathologic patient individualized clinical optimizing cancer treatment response of tumours biochemical reaction network electrical activity bidomain tissue representation ionic models cardiac nonlinear finite element simulation tool biomodels plotting bidomain agent tag keywords soft tissue modelling methods test driven cellml ecg aecg hl7 cardiotek converter ontology systems_biology modeling medical images dicom processing visualization framework medical images browser

Powered by RafCloud 2.0.2

Getting involved PDFPrintE-mail

Browsing the ToolKit portal is possible for anyone, but to contribute, you need to have an account.

NoE members should be able to log in using the same account details as for the main VPH NoE website. Other individuals may register for an account - this is open to anyone.

Once you are logged in, you will see a second menu on the left, containing links allowing you to submit a Tool, Method, or Service. These will present you with a form in which to enter all the relevant details. Tooltips provide guidelines on what information to include in each field.

A particularly interesting field is the "Tag Keywords", in which you can enter comma separately keywords to assist users in finding your entry when searching. The most commonly used keywords are displayed in the "Tag cloud" at the top of each page, which is automatically updated each hour.

We invite entry submissions from anyone, not just developers - if you use a tool that you think the community could benefit from, then do add it! Conversely, if you find that a tool you developed has been added by someone else, and would like 'ownership' of the entry in order to edit it, please This e-mail address is being protected from spambots. You need JavaScript enabled to view it .

Logged-in users also have the ability to provide feedback on entries in the database, either by a simple ranking, or by giving a more in-depth review of their experiences.

If you are developing a tool, method, or service for submission to the ToolKit, we recommend that you review our guideline documents. These are relatively short overviews of different topics of importance to content authors, which offer advice on producing high quality material.

This website itself is also under active development. If you have any ideas for improvements, please This e-mail address is being protected from spambots. You need JavaScript enabled to view it !