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VPH NoE ToolKit

Category: Tools

This section contains a variety of software tools for supporting and enabling VPH research. There are many categories of tools, due to the varied nature of the research involved. Many of the tools listed were not developed specifically for this research effort, but have wider application.

Data Conversion Tools

Data Conversion Tools (10/- )

Convert data between formats

Modelling Tools

Modelling Tools (54/4 )

Tools for model development and useAnalysis, Converters, Editors, Solvers

Imaging

Imaging (25/1 )

Image visualisation, analysis, and processing toolsDevelopment environments/platforms

Compute Resources

Compute Resources (14/2 )

Tools for working with compute facilitiesTools for accessing compute resources, Workflow

Data Fusion

Data Fusion (14/- )

Deriving information from multiple datasets

Collaborative Tools

Collaborative Tools (13/- )

Aiding collaborative VPH research

 MD analysis tools Hot  0Reviews: 0
Date added: 17.8.2010  Version:     beta Hits: 653
Submitter: Toni Giorgino  This e-mail address is being protected from spambots. You need JavaScript enabled to view it  Web Site License:  GPL v3
Supported platform:  linux Target user group: Researchers
Website:  Tool website Technology type: Software
Categories: Data Conversion Tools | Analysis

A collection of tools to conduct large-scale analysis on molecular data.

elastix elastix Hot  0Reviews: 0
Date added: 29.1.2010  Version:  4.3   mature Hits: 494
Submitter: Stefan Klein  This e-mail address is being protected from spambots. You need JavaScript enabled to view it  Web Site License:  3-clause BSD
Supported platform:  windows macintosh linux Target user group: Researchers
Website:  Tool website Technology type: Software
Tags: image,  registration,  data fusion,  alignment Categories: Data Fusion

Elastix is a toolbox for medical image registration.

GIMIAS GIMIAS Hot  10Reviews: 0
Date added: 22.7.2009  Version:  0.6.10   beta Hits: 449
Submitter: WP3 team  This e-mail address is being protected from spambots. You need JavaScript enabled to view it  Web Site License:  3-clause BSD
Supported platform:  windows Target user group: Any
Website:  Tool website Technology type: Software
Tags: imaging,  analysis,  modular,  plugin,  dicom,   Categories: Analysis | Development environments/platforms

GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins.

 CreaTools Hot  10Reviews: 0
Date added: 27.7.2009  Version:  2.0.1   mature Hits: 442
Submitter: Frederic Cervenansky  This e-mail address is being protected from spambots. You need JavaScript enabled to view it  Web Site License:  CeCILL v2
Supported platform:  windows macintosh linux Target user group: Any
Website:  Tool website Technology type: Software
Tags: medical images,  DICOM,  processing,  visualization,  framework,   Categories: Development environments/platforms

The CreaTools are a suite of medical image processing and visualization software and development tools (libraries, utilities...).

Adun Adun Hot  0Reviews: 0
Date added: 17.8.2009  Version:  0.81   alpha Hits: 396
Submitter: J Villa  This e-mail address is being protected from spambots. You need JavaScript enabled to view it  Web Site License:  GPL v2
Supported platform:  macintosh linux Target user group: Researchers; Students
Website:  Tool website Technology type: Software
Tags: molecular simulations,  high performance productivity,  framework based,  Cocoa,  GNUstep Categories: Collaborative Tools | Solvers | Analysis | Converters | Tools for accessing compute resources

Adun is a new extendible molecular simulation program that also includes data management and analysis capabilities.

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